PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G100700.2.p
Common NamePRUPE_ppa002762mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 572aa    MW: 63509.9 Da    PI: 5.9478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G100700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.91e-14372418455
                         HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +h   ErrRR+++N++f  L++++P+ +      K +K++iL  A+eY+k+L+
  Prupe.5G100700.2.p 372 NHALSERRRREKLNERFCVLKSMVPSiS------KDDKVSILDDAIEYLKDLE 418
                         7999**********************66......****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.6E-383128IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.514368417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.95E-18370429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-14371422No hitNo description
Gene3DG3DSA:4.10.280.107.3E-18372429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-12372418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-13374423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009957Biological Processepidermal cell fate specification
GO:0010091Biological Processtrichome branching
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MGLQRSEQLR ELYESLSAGE ASPQARRPSA SLSPEDLADT EWYYLVCMSF VFNVGQGLPG  60
RTLANGQPIW LCNAHYADSK VFTRSLLAKS ASIQTVVCFP FLGGVIELGV TELVMEDPDL  120
IQHVKTSFLE VPYPIASKKT NPSVGSTRND NDLACTVLDH DVMDAKLIPV VGCEEMNATS  180
PNNSSNGLGL NQPADDSFMV EGMNGGASQV QSWQFMDDEF SNFVHHSMDS SDCISQTLVY  240
PEKVPLGPKA EKASDHCLHD LKERNSTKLT SLGPQGTDLQ YQSVLSALLK GSHQLILGPN  300
FQNCHQESNF VSWKRGGFVK CRKQRGGSPQ KLLKQILFEV PRMHVDCVLE SPEDNSNRNG  360
VWRPEADEIG MNHALSERRR REKLNERFCV LKSMVPSISK DDKVSILDDA IEYLKDLEKR  420
VEELESCREP SDLEAKIKRK IQDTIERTSD NCCNTKISNG KKPLVYKRKA SDIDETEPEI  480
SYVVSKHGSS DNITVNMNKK DVLIEMKFPW REGVLLEIMD ATSRLQLDTH SVQSSTADGI  540
LSVTIKSRFK GSTVASAGTI QQALQRIARS C*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1376381ERRRRE
2377382RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894040.0KP689404.1 Prunus pseudocerasus isolate Unigene15653 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209040.10.0hypothetical protein PRUPE_ppa002762mg
SwissprotQ9FN690.0GL3_ARATH; Transcription factor GLABRA 3
TrEMBLM5W9510.0M5W951_PRUPE; Uncharacterized protein
STRINGPOPTR_0001s09450.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-179bHLH family protein